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hasD_1 hasD_1 hasD_2 hasD_2 hasD_3 hasD_3 hasE hasE hasF hasF EXF47355.1 EXF47355.1 vapC vapC vapB1 vapB1 EXF47255.1 EXF47255.1 EXF47256.1 EXF47256.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hasD_1Heme acquisition ABC transporter HasD, ATP-binding protein. (80 aa)    
Predicted Functional Partners:
hasD_2
Type 1 secretion system ATPase HasD.
 
  
  0.964
hasD_3
Type 1 secretion system ATPase HasD.
 
  
  0.906
hasE
Type 1 secretion system membrane fusion protein HasE.
 
  
 0.896
hasF
Type 1 secretion system outer membrane protein HasF.
 
  
 0.680
EXF47355.1
Putative hemagglutinin/hemolysin-related protein.
 
 
 0.538
vapC
PilT domain-containing protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
       0.514
vapB1
Antitoxin VapB1.
       0.514
EXF47255.1
Peptide ABC transporter periplasmic peptide-binding protein.
     
 0.458
EXF47256.1
ABC transporter substrate-binding protein.
     
 0.458
Your Current Organism:
Pseudomonas sp. BAY1663
NCBI taxonomy Id: 1439940
Other names: P. sp. BAY1663
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